STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109518000Kruppel-like factor 5 like. (418 aa)    
Predicted Functional Partners:
ENSHCOP00000007987
CCAAT enhancer binding protein beta.
    
 0.634
ENSHCOP00000027476
CCAAT/enhancer-binding protein.
    
 0.634
wwp1
E3 ubiquitin-protein ligase.
    
 0.578
LOC109512841
E1A binding protein p300 a.
    
 0.497
LOC109514850
E1A binding protein p300 b.
    
 0.497
b4galt2
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
      
 0.471
ENSHCOP00000011422
Uncharacterized protein.
      
 0.468
LOC109511986
BZIP domain-containing protein.
    
 0.463
ENSHCOP00000020624
CCAAT enhancer binding protein alpha.
    
 0.463
Pibf1
Progesterone immunomodulatory binding factor 1.
 
  
 0.411
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.