STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109511158Chemokine-like receptor 1; Belongs to the G-protein coupled receptor 1 family. (345 aa)    
Predicted Functional Partners:
app
Amyloid beta precursor protein.
    
 0.605
LOC109524673
Amyloid beta (A4) precursor protein b.
    
 0.605
anxa2
Annexin.
    
 0.513
anxa1
Annexin.
    
 0.513
LOC109529750
Annexin.
    
 0.513
ENSHCOP00000026458
BPTI/Kunitz inhibitor domain-containing protein.
    
 0.428
ENSHCOP00000026480
Amyloid beta (A4) precursor-like protein 2.
    
 0.428
hebp1
Uncharacterized protein.
     
 0.424
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.