STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scxScleraxis bHLH transcription factor a. (208 aa)    
Predicted Functional Partners:
LOC109525024
Mothers against decapentaplegic homolog.
      
 0.570
smad2
Mothers against decapentaplegic homolog.
      
 0.570
LOC109510088
ADAM metallopeptidase domain 12.
      
 0.570
LOC109507402
Transcription factor 3a.
    
 0.464
tcf12
Transcription factor 12.
    
 0.464
LOC109507481
BHLH domain-containing protein.
    
 0.464
LOC109532234
Transcription factor 3b.
    
 0.464
TCF4
Transcription factor 4.
    
 0.464
LOC109512683
LIM domain binding 1a.
    
 0.425
LOC109526252
LIM domain binding 2a.
    
 0.425
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.