STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fastkd2FAST kinase domains 2. (653 aa)    
Predicted Functional Partners:
ngrn
Neugrin, neurite outgrowth associated.
    
 
 0.815
mterf3
Mitochondrial transcription termination factor 3.
   
 
 0.773
ddx28
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.
   
 
 0.759
trub2
TruB pseudouridine (psi) synthase family member 2.
   
 
 0.735
LOC109522466
RNA pseudouridine synthase D4.
   
 
 0.691
fastkd3
FAST kinase domains 3.
   
 
 0.631
supv3l1
SUV3-like helicase.
   
  
 0.626
LOC109518860
Fas-activated serine/threonine kinase.
      
 0.617
fastkd1
FAST kinase domains 1.
      
 0.588
lamp2
Lysosomal-associated membrane protein 2.
      
 0.577
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.