STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109517578Signal transducer and activator of transcription. (676 aa)    
Predicted Functional Partners:
LOC109522194
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.935
jak2
Tyrosine-protein kinase.
    
 0.931
jak1
Tyrosine-protein kinase.
    
 0.931
LOC109519251
Uncharacterized protein.
    
  0.917
irf9
IRF tryptophan pentad repeat domain-containing protein.
   
 0.910
LOC109522346
Signal transducer and activator of transcription.
  
  
 
0.908
stat1
Signal transducer and activator of transcription.
  
  
 
0.905
LOC109519009
Tyrosine-protein kinase.
    
 0.760
LOC109510662
Macrophage stimulating 1 receptor a.
   
 0.585
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.585
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.