unc45a protein (Hippocampus comes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

unc45a

Unc-45 myosin chaperone A. (810 aa)

Predicted Functional Partners:

hsp90ab1

0.623

LOC109531013

0.623

LOC109508194

0.623

LOC109531014

0.623

hsp90b1

0.598

myo1e

0.579

LOC109512126

0.579

LOC109519052

0.579

trap1

0.575

LOC109525278

0.575

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109508194	unc45a	ENSHCOP00000022788	ENSHCOP00000008046	Uncharacterized protein.	Unc-45 myosin chaperone A.	0.623
LOC109512126	unc45a	ENSHCOP00000008747	ENSHCOP00000008046	Myosin IEb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Unc-45 myosin chaperone A.	0.579
LOC109519052	unc45a	ENSHCOP00000020732	ENSHCOP00000008046	Myosin IF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Unc-45 myosin chaperone A.	0.579
LOC109525278	unc45a	ENSHCOP00000017204	ENSHCOP00000008046	Uncharacterized protein.	Unc-45 myosin chaperone A.	0.575
LOC109531013	LOC109531014	ENSHCOP00000011716	ENSHCOP00000024923	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Heat shock protein 90 alpha family class A member 1.	0.900
LOC109531013	hsp90ab1	ENSHCOP00000011716	ENSHCOP00000003821	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Heat shock protein 90, alpha (cytosolic), class B member 1.	0.933
LOC109531013	unc45a	ENSHCOP00000011716	ENSHCOP00000008046	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Unc-45 myosin chaperone A.	0.623
LOC109531014	LOC109531013	ENSHCOP00000024923	ENSHCOP00000011716	Heat shock protein 90 alpha family class A member 1.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	0.900
LOC109531014	hsp90ab1	ENSHCOP00000024923	ENSHCOP00000003821	Heat shock protein 90 alpha family class A member 1.	Heat shock protein 90, alpha (cytosolic), class B member 1.	0.933
LOC109531014	unc45a	ENSHCOP00000024923	ENSHCOP00000008046	Heat shock protein 90 alpha family class A member 1.	Unc-45 myosin chaperone A.	0.623
hsp90ab1	LOC109531013	ENSHCOP00000003821	ENSHCOP00000011716	Heat shock protein 90, alpha (cytosolic), class B member 1.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	0.933
hsp90ab1	LOC109531014	ENSHCOP00000003821	ENSHCOP00000024923	Heat shock protein 90, alpha (cytosolic), class B member 1.	Heat shock protein 90 alpha family class A member 1.	0.933
hsp90ab1	unc45a	ENSHCOP00000003821	ENSHCOP00000008046	Heat shock protein 90, alpha (cytosolic), class B member 1.	Unc-45 myosin chaperone A.	0.623
hsp90b1	unc45a	ENSHCOP00000023342	ENSHCOP00000008046	Heat shock protein 90, beta (grp94), member 1.	Unc-45 myosin chaperone A.	0.598
myo1e	unc45a	ENSHCOP00000002239	ENSHCOP00000008046	Myosin IEa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Unc-45 myosin chaperone A.	0.579
trap1	unc45a	ENSHCOP00000006726	ENSHCOP00000008046	TNF receptor-associated protein 1.	Unc-45 myosin chaperone A.	0.575
unc45a	LOC109508194	ENSHCOP00000008046	ENSHCOP00000022788	Unc-45 myosin chaperone A.	Uncharacterized protein.	0.623
unc45a	LOC109512126	ENSHCOP00000008046	ENSHCOP00000008747	Unc-45 myosin chaperone A.	Myosin IEb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.579
unc45a	LOC109519052	ENSHCOP00000008046	ENSHCOP00000020732	Unc-45 myosin chaperone A.	Myosin IF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.579
unc45a	LOC109525278	ENSHCOP00000008046	ENSHCOP00000017204	Unc-45 myosin chaperone A.	Uncharacterized protein.	0.575