STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A1Solute carrier family 39 member 1. (316 aa)    
Predicted Functional Partners:
samm50
SAMM50 sorting and assembly machinery component.
    
 
 0.785
LOC109512152
Metaxin.
    
 
 0.691
mtx3
Metaxin.
    
 
 0.691
SLC39A11
Solute carrier family 39 member 11.
   
 0.636
slc39a7
Solute carrier family 39 member 7.
   
 0.597
Slc30a1
Uncharacterized protein.
   
 
 0.582
timm13
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
   
 
 0.574
slc39a13
Solute carrier family 39 member 13.
   
 0.530
LOC109528149
Solute carrier family 39 member 8.
   
 0.527
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 
 0.526
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.