STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000008486Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
uvrag
UV radiation resistance associated gene.
    
 
 0.947
becn1
Beclin 1, autophagy related.
    
 
 0.918
Rubcn
DUF4206 domain-containing protein.
 
  
 
 0.900
ENSHCOP00000008471
Uncharacterized protein.
 
  
 
 0.900
ENSHCOP00000008901
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.850
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.850
pik3r4
Phosphoinositide-3-kinase, regulatory subunit 4.
    
 
 0.742
atg14
Autophagy related 14.
    
 
 0.599
RAB7A
RAB7A, member RAS oncogene family.
    
 
 0.587
LOC109522217
RAB7a, member RAS oncogene family.
    
 
 0.587
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.