STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109508522Solute carrier family 7 member 8a. (491 aa)    
Predicted Functional Partners:
LOC109526434
Si:dkey-202g17.3.
   
 0.732
slc3a2
Aamy domain-containing protein.
   
 0.732
ENSHCOP00000017182
Aamy domain-containing protein.
   
 0.732
slc3a1
Solute carrier family 3 member 1.
   
 0.623
kiaa0513
Zgc:91860.
   
 0.523
alkbh2
AlkB homolog 2, alpha-ketoglutarate-dependent dioxygenase.
   
 0.523
ENSHCOP00000011266
Uncharacterized protein.
   
 0.514
AMY1C
Alpha-amylase.
   
 0.438
slc43a1
Solute carrier family 43 member 1a.
   
  
 0.415
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.