STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109524735Uncharacterized protein. (595 aa)    
Predicted Functional Partners:
mrpl13
Mitochondrial ribosomal protein L13.
    
 
 0.861
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.856
mrpl15
Mitochondrial ribosomal protein L15.
    
   0.848
mrpl46
Mitochondrial ribosomal protein L46.
    
   0.848
mrpl24
Mitochondrial ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
    
   0.848
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.848
mrpl47
Mitochondrial ribosomal protein L47.
    
   0.848
mrpl21
Uncharacterized protein.
    
   0.848
mrpl43
Mitochondrial ribosomal protein L43.
    
   0.848
sod2
Superoxide dismutase 2, mitochondrial.
  
 
 0.840
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.