STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sspnSarcospan (Kras oncogene-associated gene). (220 aa)    
Predicted Functional Partners:
sgcg
Sarcoglycan, gamma.
   
 0.806
LOC109513277
Sarcoglycan, alpha.
   
 
 0.744
sgcb
Sarcoglycan, beta (dystrophin-associated glycoprotein).
     
 0.736
LOC109515023
Peptidase S72 domain-containing protein.
     
 0.711
DAG1
Dystroglycan 1.
     
 0.711
sgcd
Sarcoglycan, delta (dystrophin-associated glycoprotein).
   
 0.701
SGCZ
Sarcoglycan zeta.
   
 0.684
sgce
Sarcoglycan, epsilon.
   
 
 0.673
SEMA4D
Semaphorin 4D; Belongs to the semaphorin family.
      
 0.592
arrdc2
Arrestin domain containing 2.
   
  
 0.489
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.