STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109519480Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
LOC109527813
Fleer.
   
 0.936
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
  
 0.933
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
   
 0.933
ttc26
Tetratricopeptide repeat domain 26.
  
 
 0.917
LOC109522020
Intraflagellar transport 88 homolog.
  
 
 0.907
ift46
Intraflagellar transport 46 homolog (Chlamydomonas).
  
 
 0.902
ift172
Intraflagellar transport 172.
    
 0.888
ift81
Intraflagellar transport 81 homolog.
    
 0.883
ENSHCOP00000007668
Uncharacterized protein.
   
 0.856
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
   
 0.856
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.