Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109519267 | brix1 | ENSHCOP00000026968 | ENSHCOP00000009278 | Uncharacterized protein. | Brix domain containing 2. | 0.999 |
LOC109519267 | ebna1bp2 | ENSHCOP00000026968 | ENSHCOP00000003472 | Uncharacterized protein. | EBNA1 binding protein 2. | 0.995 |
LOC109519267 | gtpbp4 | ENSHCOP00000026968 | ENSHCOP00000023201 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.991 |
LOC109519267 | nifk | ENSHCOP00000026968 | ENSHCOP00000021136 | Uncharacterized protein. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.991 |
LOC109519267 | nip7 | ENSHCOP00000026968 | ENSHCOP00000026764 | Uncharacterized protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.984 |
LOC109519267 | noc2l | ENSHCOP00000026968 | ENSHCOP00000004209 | Uncharacterized protein. | NOC2-like nucleolar associated transcriptional repressor. | 0.981 |
LOC109519267 | rpf1 | ENSHCOP00000026968 | ENSHCOP00000026521 | Uncharacterized protein. | Ribosome production factor 1 homolog. | 0.989 |
LOC109519267 | rpf2 | ENSHCOP00000026968 | ENSHCOP00000020776 | Uncharacterized protein. | Ribosome production factor 2 homolog. | 0.988 |
LOC109519267 | rsl1d1 | ENSHCOP00000026968 | ENSHCOP00000025220 | Uncharacterized protein. | Ribosomal L1 domain containing 1. | 0.994 |
LOC109519267 | wdr12 | ENSHCOP00000026968 | ENSHCOP00000023980 | Uncharacterized protein. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.985 |
brix1 | LOC109519267 | ENSHCOP00000009278 | ENSHCOP00000026968 | Brix domain containing 2. | Uncharacterized protein. | 0.999 |
brix1 | ebna1bp2 | ENSHCOP00000009278 | ENSHCOP00000003472 | Brix domain containing 2. | EBNA1 binding protein 2. | 0.999 |
brix1 | gtpbp4 | ENSHCOP00000009278 | ENSHCOP00000023201 | Brix domain containing 2. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
brix1 | nifk | ENSHCOP00000009278 | ENSHCOP00000021136 | Brix domain containing 2. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.999 |
brix1 | nip7 | ENSHCOP00000009278 | ENSHCOP00000026764 | Brix domain containing 2. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.997 |
brix1 | noc2l | ENSHCOP00000009278 | ENSHCOP00000004209 | Brix domain containing 2. | NOC2-like nucleolar associated transcriptional repressor. | 0.996 |
brix1 | rpf1 | ENSHCOP00000009278 | ENSHCOP00000026521 | Brix domain containing 2. | Ribosome production factor 1 homolog. | 0.996 |
brix1 | rpf2 | ENSHCOP00000009278 | ENSHCOP00000020776 | Brix domain containing 2. | Ribosome production factor 2 homolog. | 0.995 |
brix1 | rsl1d1 | ENSHCOP00000009278 | ENSHCOP00000025220 | Brix domain containing 2. | Ribosomal L1 domain containing 1. | 0.996 |
brix1 | wdr12 | ENSHCOP00000009278 | ENSHCOP00000023980 | Brix domain containing 2. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
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