STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000009348KASH domain-containing protein. (934 aa)    
Predicted Functional Partners:
ENSHCOP00000023323
Uncharacterized protein.
 
     0.945
ENSHCOP00000009211
Uncharacterized protein.
 
     0.937
ENSHCOP00000024746
Uncharacterized protein.
 
     0.937
ENSHCOP00000023309
Uncharacterized protein.
 
     0.933
ENSHCOP00000011510
Uncharacterized protein.
 
     0.923
ENSHCOP00000024698
Uncharacterized protein.
 
      0.899
ENSHCOP00000006957
Uncharacterized protein.
 
 
 
 0.749
ENSHCOP00000011173
Uncharacterized protein.
 
 
 
 0.612
LOC109511516
SUN domain-containing protein.
    
 0.514
ENSHCOP00000025539
Sad1 and UNC84 domain containing 1.
    
 0.514
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.