STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109531669Si:ch73-22o12.1. (509 aa)    
Predicted Functional Partners:
Cd226
CD226 molecule.
   
 0.937
LOC109512561
Nectin cell adhesion molecule 3b.
    
0.930
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.908
LOC109529494
Par-3 family cell polarity regulator alpha, b.
    
  0.901
LOC109516373
PVR cell adhesion molecule related 2 like.
     
 
0.900
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
    
 0.844
samm50
SAMM50 sorting and assembly machinery component.
    
 0.841
LOC109521210
Zgc:109986.
   
 0.802
tomm20
Translocase of outer mitochondrial membrane 20b.
   
 0.802
ENSHCOP00000010971
Uncharacterized protein.
   
 0.791
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.