STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109514938Si:busm1-52i16.2. (321 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
    
 0.608
pex3
Peroxisomal biogenesis factor 3.
     
 0.590
pex16
Peroxisomal membrane protein PEX16.
     
 0.566
pex13
Peroxisomal biogenesis factor 13.
     
 0.566
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.563
gdap1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
    
 0.493
gdap1l1
Ganglioside induced differentiation associated protein 1-like 1.
    
 0.493
pex11b
Peroxisomal biogenesis factor 11 beta.
    
 0.480
pex11g
Peroxisomal biogenesis factor 11 gamma.
    
 0.480
ENSHCOP00000009612
Uncharacterized protein.
    
 0.480
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.