STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000010256Dachsous cadherin-related 1b. (1286 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.499
LOC109527442
Junction plakoglobin a.
    
 0.499
LOC109513623
Uncharacterized protein.
    
 0.499
LOC109529128
Uncharacterized protein.
    
 0.499
ctnna1
Catenin (cadherin-associated protein), alpha 1.
    
 0.457
ctnna2
Catenin (cadherin-associated protein), alpha 2.
    
 0.457
LOC109516119
Uncharacterized protein.
    
 0.457
LOC109523889
Protocadherin-related 15b.
   
0.448
LOC109523010
Uncharacterized protein.
   
0.448
pcdh15
Protocadherin-related 15a.
   
0.448
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.