STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109528500Zgc:193690. (485 aa)    
Predicted Functional Partners:
gle1
GLE1 RNA export mediator.
    
 
 0.903
nup214
Nup214_FG domain-containing protein.
    
 
 0.898
mif4gd
MIF4G domain containing a.
    
   0.749
nxf1
Zgc:153681.
    
 
 0.674
ctif
CBP80/20-dependent translation initiation factor.
    
   0.587
xpo1
Exportin 1 (CRM1 homolog, yeast) b.
    
 
 0.448
ENSHCOP00000005314
Uncharacterized protein.
    
 
 0.448
zc3h14
Zinc finger CCCH-type containing 14.
   
 
 0.448
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
   0.446
rae1
Ribonucleic acid export 1.
   
  
 0.445
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.