Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fau | ltv1 | ENSHCOP00000011627 | ENSHCOP00000017798 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | LTV1 ribosome biogenesis factor. | 0.995 |
fau | nob1 | ENSHCOP00000011627 | ENSHCOP00000005099 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 0.999 |
fau | riok1 | ENSHCOP00000011627 | ENSHCOP00000010637 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. | 0.996 |
fau | rps15 | ENSHCOP00000011627 | ENSHCOP00000004489 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. | 0.999 |
fau | rps2 | ENSHCOP00000011627 | ENSHCOP00000026048 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
fau | rps3 | ENSHCOP00000011627 | ENSHCOP00000003692 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
fau | rps6 | ENSHCOP00000011627 | ENSHCOP00000014904 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
fau | rps7 | ENSHCOP00000011627 | ENSHCOP00000009789 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.999 |
fau | rps9 | ENSHCOP00000011627 | ENSHCOP00000016969 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 0.999 |
ltv1 | fau | ENSHCOP00000017798 | ENSHCOP00000011627 | LTV1 ribosome biogenesis factor. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.995 |
ltv1 | nob1 | ENSHCOP00000017798 | ENSHCOP00000005099 | LTV1 ribosome biogenesis factor. | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 0.999 |
ltv1 | riok1 | ENSHCOP00000017798 | ENSHCOP00000010637 | LTV1 ribosome biogenesis factor. | Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. | 0.995 |
ltv1 | rps15 | ENSHCOP00000017798 | ENSHCOP00000004489 | LTV1 ribosome biogenesis factor. | Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. | 0.997 |
ltv1 | rps2 | ENSHCOP00000017798 | ENSHCOP00000026048 | LTV1 ribosome biogenesis factor. | Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
ltv1 | rps3 | ENSHCOP00000017798 | ENSHCOP00000003692 | LTV1 ribosome biogenesis factor. | Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
ltv1 | rps6 | ENSHCOP00000017798 | ENSHCOP00000014904 | LTV1 ribosome biogenesis factor. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.987 |
ltv1 | rps7 | ENSHCOP00000017798 | ENSHCOP00000009789 | LTV1 ribosome biogenesis factor. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.983 |
ltv1 | rps9 | ENSHCOP00000017798 | ENSHCOP00000016969 | LTV1 ribosome biogenesis factor. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. | 0.986 |
nob1 | fau | ENSHCOP00000005099 | ENSHCOP00000011627 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.999 |
nob1 | ltv1 | ENSHCOP00000005099 | ENSHCOP00000017798 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | LTV1 ribosome biogenesis factor. | 0.999 |
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