STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cib2Calcium and integrin binding family member 2. (193 aa)    
Predicted Functional Partners:
LOC109520909
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.654
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.654
nin
Ninein (GSK3B interacting protein).
    
 
 0.633
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 
 0.620
ube2v1
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
 0.571
tmie
Transmembrane inner ear.
     
 0.567
trip13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
    
 0.563
LOC109520123
Lumican.
    
 0.543
spice1
Spindle and centriole associated protein 1.
      
 0.541
htr5a
5-hydroxytryptamine (serotonin) receptor 5A, genome duplicate b.
    
 0.535
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.