STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000010809Uncharacterized protein. (50 aa)    
Predicted Functional Partners:
espl1
Extra spindle pole bodies like 1, separase.
    
 
 0.840
ENSHCOP00000003822
Metallophos domain-containing protein.
   
 0.805
ENSHCOP00000003831
Serine/threonine-protein phosphatase.
   
 0.805
LOC109513480
Serine/threonine-protein phosphatase.
   
 0.805
ppp2ca
Serine/threonine-protein phosphatase.
   
 0.805
nrde2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.795
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
  0.781
Atr
Uncharacterized protein.
   
   0.769
Ppp4r1
Uncharacterized protein.
   
 0.712
ENSHCOP00000000341
Uncharacterized protein.
   
 0.712
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.