STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109523286Enah/Vasp-like b. (401 aa)    
Predicted Functional Partners:
tes
Testis derived transcript (3 LIM domains).
   
 0.676
LOC109515397
Zyxin.
   
 0.657
LOC109522602
Filamin binding LIM protein 1.
    
 0.645
ENSHCOP00000008755
Protein kinase domain-containing protein.
    
 0.625
nf1
Neurofibromin 1b.
    
 0.625
nek2
NIMA-related kinase 2.
    
 0.625
trip6
Uncharacterized protein.
    
 0.592
LOC109532339
LIM domain containing preferred translocation partner in lipoma.
    
 0.592
LOC109519026
Profilin; Belongs to the profilin family.
   
 0.528
ENSHCOP00000017292
Profilin; Belongs to the profilin family.
   
 0.528
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.