Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HOOK3 | LOC109513549 | ENSHCOP00000011167 | ENSHCOP00000022943 | Hook microtubule tethering protein 3. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.670 |
HOOK3 | LOC109520292 | ENSHCOP00000011167 | ENSHCOP00000004042 | Hook microtubule tethering protein 3. | Uncharacterized protein. | 0.462 |
HOOK3 | aktip | ENSHCOP00000011167 | ENSHCOP00000000148 | Hook microtubule tethering protein 3. | Akt interacting protein. | 0.818 |
HOOK3 | bicdl1 | ENSHCOP00000011167 | ENSHCOP00000004571 | Hook microtubule tethering protein 3. | BICD family like cargo adaptor 1. | 0.537 |
HOOK3 | dhfr | ENSHCOP00000011167 | ENSHCOP00000011900 | Hook microtubule tethering protein 3. | Dihydrofolate reductase. | 0.475 |
HOOK3 | dync1li2 | ENSHCOP00000011167 | ENSHCOP00000019031 | Hook microtubule tethering protein 3. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.670 |
HOOK3 | fam160b1 | ENSHCOP00000011167 | ENSHCOP00000028347 | Hook microtubule tethering protein 3. | Family with sequence similarity 160 member B1. | 0.516 |
HOOK3 | hook2 | ENSHCOP00000011167 | ENSHCOP00000007337 | Hook microtubule tethering protein 3. | Hook microtubule-tethering protein 2. | 0.484 |
HOOK3 | mcm4 | ENSHCOP00000011167 | ENSHCOP00000027508 | Hook microtubule tethering protein 3. | DNA helicase; Belongs to the MCM family. | 0.560 |
HOOK3 | rab11fip3 | ENSHCOP00000011167 | ENSHCOP00000002862 | Hook microtubule tethering protein 3. | RAB11 family interacting protein 3 (class II). | 0.559 |
LOC109513549 | HOOK3 | ENSHCOP00000022943 | ENSHCOP00000011167 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Hook microtubule tethering protein 3. | 0.670 |
LOC109513549 | bicdl1 | ENSHCOP00000022943 | ENSHCOP00000004571 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | BICD family like cargo adaptor 1. | 0.663 |
LOC109513549 | dync1li2 | ENSHCOP00000022943 | ENSHCOP00000019031 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.924 |
LOC109513549 | hook2 | ENSHCOP00000022943 | ENSHCOP00000007337 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Hook microtubule-tethering protein 2. | 0.597 |
LOC109520292 | HOOK3 | ENSHCOP00000004042 | ENSHCOP00000011167 | Uncharacterized protein. | Hook microtubule tethering protein 3. | 0.462 |
LOC109520292 | aktip | ENSHCOP00000004042 | ENSHCOP00000000148 | Uncharacterized protein. | Akt interacting protein. | 0.634 |
LOC109520292 | hook2 | ENSHCOP00000004042 | ENSHCOP00000007337 | Uncharacterized protein. | Hook microtubule-tethering protein 2. | 0.529 |
aktip | HOOK3 | ENSHCOP00000000148 | ENSHCOP00000011167 | Akt interacting protein. | Hook microtubule tethering protein 3. | 0.818 |
aktip | LOC109520292 | ENSHCOP00000000148 | ENSHCOP00000004042 | Akt interacting protein. | Uncharacterized protein. | 0.634 |
aktip | fam160b1 | ENSHCOP00000000148 | ENSHCOP00000028347 | Akt interacting protein. | Family with sequence similarity 160 member B1. | 0.488 |
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