STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109530238Sushi domain-containing protein. (607 aa)    
Predicted Functional Partners:
LOC109530099
Tyrosine hydroxylase 2.
     
 0.915
th
Tyrosine hydroxylase.
     
 0.915
got2
Aspartate aminotransferase.
    
 0.910
got1
Aspartate aminotransferase.
    
 0.910
GOT1
Aspartate aminotransferase.
    
 0.910
ENSHCOP00000028078
Eosinophil peroxidase.
  
  
 
0.904
TYR
Tyrosinase.
     
 0.903
tyr
Tyrosinase.
     
 0.903
tat
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
     
  0.900
LOC109510681
Amine oxidase.
     
 0.900
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.