STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efhc1EF-hand domain (C-terminal) containing 1. (589 aa)    
Predicted Functional Partners:
Pacrg
PARK2 co-regulated.
  
 
 0.948
wdr90
WD repeat domain 90.
    
 
 0.919
cfap52
Cilia and flagella associated protein 52.
  
 
 0.896
tekt3
Tektin 3.
   
 
 0.865
cfap126
Cilia and flagella associated protein 126.
   
 
 0.856
efhb
Uncharacterized protein.
   
   0.853
efhc2
EF-hand domain (C-terminal) containing 2.
  
 
0.847
ENSHCOP00000002720
Sperm associated antigen 8.
   
   0.829
mns1
Meiosis-specific nuclear structural 1.
    
 
 0.821
ccdc173
Coiled-coil domain containing 173.
   
   0.821
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.