STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109516296Synaptotagmin XV. (284 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.571
ENSHCOP00000009027
SH3 domain-containing protein.
     
 0.567
ENSHCOP00000009056
Uncharacterized protein.
     
 0.567
ENSHCOP00000023126
Uncharacterized protein.
     
 0.567
ENSHCOP00000027446
Uncharacterized protein.
     
 0.567
ENSHCOP00000027460
Uncharacterized protein.
     
 0.567
myrip
Myosin VIIA and Rab interacting protein.
  
   
 0.475
rapsn
Receptor-associated protein of the synapse, 43kD.
   
  
 0.473
alg14
ALG14 UDP-N-acetylglucosaminyltransferase subunit.
      
 0.471
LOC109520909
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
     
 0.441
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.