STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000012640DDHD domain-containing protein. (864 aa)    
Predicted Functional Partners:
pitpnc1
Uncharacterized protein.
 
    
 0.902
LOC109509744
Phosphatidylinositol transfer protein, alpha b.
 
    
 0.900
ENSHCOP00000002088
Uncharacterized protein.
 
      0.899
LOC109510716
Phosphatidylinositol transfer protein, alpha a.
 
    
 0.898
LOC109507167
Uncharacterized protein.
 
    
 0.896
LOC109527808
Uncharacterized protein.
 
    
 0.895
mrm3
Mitochondrial rRNA methyltransferase 3a.
      
 0.463
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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