STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109522747Chromo domain-containing protein. (169 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.885
pcgf2
Polycomb group ring finger 2.
    
 0.831
Bmi1
Bmi1 polycomb ring finger oncogene 1a.
    
 0.831
LOC109518595
Chromo domain-containing protein.
    
0.827
LOC109527520
Chromobox homolog 8b.
    
0.787
LOC109522748
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
0.787
cbx2
Chromobox homolog 2 (Drosophila Pc class).
    
0.766
eed
Embryonic ectoderm development.
    
 0.633
LOC109507630
Polyhomeotic homolog 2b (Drosophila).
    
 0.626
pcgf5
Polycomb group ring finger 5a.
    
 0.614
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.