STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109517296Synaptojanin 2 binding protein. (145 aa)    
Predicted Functional Partners:
LOC109516159
Ribosome binding protein 1a.
    
 0.628
dcaf10
WD repeat domain 32.
      
 0.573
cunh17orf75
Zgc:153240.
      
 0.572
ciao1
Probable cytosolic iron-sulfur protein assembly protein CIAO1; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. Belongs to the WD repeat CIA1 family.
      
 0.560
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.554
ift172
Intraflagellar transport 172.
    
 0.552
SLCO5A1
Solute carrier organic anion transporter family member.
    
   0.546
LOC109518851
Solute carrier organic anion transporter family member.
    
   0.546
slco4a1
Solute carrier organic anion transporter family member.
    
   0.546
ATAD3A
ATPase family AAA domain containing 3A.
   
 
 0.512
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.