STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109515471Uncharacterized protein. (358 aa)    
Predicted Functional Partners:
LOC109510662
Macrophage stimulating 1 receptor a.
   
 0.945
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.945
mst1r
Macrophage stimulating 1 receptor b.
   
 0.945
TNS1
Tensin 1.
 
    
 0.903
ENSHCOP00000026089
SH2 domain-containing protein.
 
    
 0.903
ENSHCOP00000008210
Uncharacterized protein.
 
    
 0.870
tns4
SH2 domain-containing protein.
 
    
 0.768
itgbl1
Integrin, beta-like 1.
   
 0.663
LOC109532691
Integrin beta; Belongs to the integrin beta chain family.
   
 0.663
ENSHCOP00000008393
Integrin beta.
   
 0.663
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.