STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000013939HECT domain-containing protein. (203 aa)    
Predicted Functional Partners:
ENSHCOP00000009419
Uncharacterized protein.
 
 
 0.906
ENSHCOP00000013928
HECW_N domain-containing protein.
 
      0.899
ENSHCOP00000026326
C2 domain-containing protein.
 
      0.899
ENSHCOP00000023838
C2 domain-containing protein.
 
      0.898
rps27a
Ribosomal protein S27a.
    
 0.757
ubb
Ubiquitin B.
    
 0.703
ubc
Uncharacterized protein.
    
 0.703
smad6
Mothers against decapentaplegic homolog.
    
 0.668
smad7
Mothers against decapentaplegic homolog.
    
 0.668
ENSHCOP00000007719
Ubiquitin-like domain-containing protein.
    
 0.658
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.