STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kdm6aUncharacterized protein. (109 aa)    
Predicted Functional Partners:
rbbp5
Retinoblastoma binding protein 5.
    
 0.957
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.955
ENSHCOP00000006213
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.949
birc6
Baculoviral IAP repeat containing 6.
   
 0.949
atp5f1d
ATP synthase F1 subunit delta.
  
 0.933
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 0.915
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.904
eed
Embryonic ectoderm development.
   
 0.886
ENSHCOP00000001779
Histone H3; Belongs to the histone H3 family.
   
 0.884
Alkbh3
Uncharacterized protein.
   
 0.884
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.