STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekPleckstrin. (397 aa)    
Predicted Functional Partners:
ptn
Pleiotrophin.
      
 0.569
rabif
RAB interacting factor.
      
 0.565
fermt3
Fermitin family member 3b.
   
  
 0.464
LOC109521364
Regulator of G protein signaling 18.
   
  
 0.423
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
   
  
 0.420
ENSHCOP00000027803
Uncharacterized protein.
   
  
 0.418
CDC42
Cell division cycle 42.
   
 
 0.415
LOC109521595
Uncharacterized protein.
   
 
 0.415
Wdfy4
WDFY family member 4.
   
  
 0.411
ENSHCOP00000005382
Tetraspanin.
   
  
 0.407
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.