STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000014655DCB domain-containing protein. (44 aa)    
Predicted Functional Partners:
Dopey1
DOP1 leucine zipper like protein A.
   
 
 0.689
ENSHCOP00000011726
Uncharacterized protein.
   
 
 0.689
ENSHCOP00000011737
Dopey_N domain-containing protein.
   
 
 0.689
Dopey2
DOP1 leucine zipper like protein B.
   
 
 0.689
ENSHCOP00000019371
Dopey_N domain-containing protein.
   
 
 0.689
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
   
 
 0.657
LOC109518260
Uncharacterized protein.
    
 
 0.587
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.587
arfrp1
ADP-ribosylation factor related protein 1.
    
 
 0.572
fbxo38
F-box protein 38.
   
  
 0.488
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.