STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stx8Syntaxin 8. (257 aa)    
Predicted Functional Partners:
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.995
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.995
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 0.991
LOC109509751
Syntaxin 7-like; Belongs to the syntaxin family.
    
 0.987
LOC109525032
Vesicle-associated membrane protein 8 (endobrevin).
    
 0.972
stx16
Syntaxin 16; Belongs to the syntaxin family.
    
 0.967
stx12
Syntaxin 12; Belongs to the syntaxin family.
    
 0.941
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.924
Stx17
Uncharacterized protein.
    
 0.880
napg
N-ethylmaleimide-sensitive factor attachment protein, gamma b.
    
 0.878
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.