Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109524366 | cd3eap | ENSHCOP00000018599 | ENSHCOP00000015527 | RNA polymerase I and III subunit D. | Uncharacterized protein. | 0.998 |
LOC109524366 | polr1a | ENSHCOP00000018599 | ENSHCOP00000002215 | RNA polymerase I and III subunit D. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
LOC109524366 | polr1b | ENSHCOP00000018599 | ENSHCOP00000008470 | RNA polymerase I and III subunit D. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
LOC109524366 | polr1c | ENSHCOP00000018599 | ENSHCOP00000001250 | RNA polymerase I and III subunit D. | RNA polymerase I and III subunit C. | 0.999 |
LOC109524366 | polr1e | ENSHCOP00000018599 | ENSHCOP00000001753 | RNA polymerase I and III subunit D. | RNA polymerase I subunit E. | 0.987 |
LOC109524366 | polr2f | ENSHCOP00000018599 | ENSHCOP00000004669 | RNA polymerase I and III subunit D. | Polymerase (RNA) II (DNA directed) polypeptide F. | 0.999 |
LOC109524366 | polr2k | ENSHCOP00000018599 | ENSHCOP00000013165 | RNA polymerase I and III subunit D. | Polymerase (RNA) II (DNA directed) polypeptide K. | 0.999 |
LOC109524366 | polr2l | ENSHCOP00000018599 | ENSHCOP00000021677 | RNA polymerase I and III subunit D. | Polymerase (RNA) II (DNA directed) polypeptide L. | 0.999 |
LOC109524366 | twistnb | ENSHCOP00000018599 | ENSHCOP00000022693 | RNA polymerase I and III subunit D. | TWIST neighbor. | 0.999 |
LOC109524366 | znrd1 | ENSHCOP00000018599 | ENSHCOP00000026742 | RNA polymerase I and III subunit D. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
cd3eap | LOC109524366 | ENSHCOP00000015527 | ENSHCOP00000018599 | Uncharacterized protein. | RNA polymerase I and III subunit D. | 0.998 |
cd3eap | polr1a | ENSHCOP00000015527 | ENSHCOP00000002215 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
cd3eap | polr1b | ENSHCOP00000015527 | ENSHCOP00000008470 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
cd3eap | polr1c | ENSHCOP00000015527 | ENSHCOP00000001250 | Uncharacterized protein. | RNA polymerase I and III subunit C. | 0.999 |
cd3eap | polr1e | ENSHCOP00000015527 | ENSHCOP00000001753 | Uncharacterized protein. | RNA polymerase I subunit E. | 0.999 |
cd3eap | polr2f | ENSHCOP00000015527 | ENSHCOP00000004669 | Uncharacterized protein. | Polymerase (RNA) II (DNA directed) polypeptide F. | 0.997 |
cd3eap | polr2k | ENSHCOP00000015527 | ENSHCOP00000013165 | Uncharacterized protein. | Polymerase (RNA) II (DNA directed) polypeptide K. | 0.984 |
cd3eap | polr2l | ENSHCOP00000015527 | ENSHCOP00000021677 | Uncharacterized protein. | Polymerase (RNA) II (DNA directed) polypeptide L. | 0.996 |
cd3eap | twistnb | ENSHCOP00000015527 | ENSHCOP00000022693 | Uncharacterized protein. | TWIST neighbor. | 0.999 |
cd3eap | znrd1 | ENSHCOP00000015527 | ENSHCOP00000026742 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
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