STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109531368Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
rock1
Rho-associated, coiled-coil containing protein kinase 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 0.971
LOC109511100
Protein kinase N1a.
   
 0.965
pkn2
Protein kinase N2.
   
 0.965
LOC109512524
Rho GTPase activating protein 35b.
    
 0.964
arhgap35
Uncharacterized protein.
    
 0.964
arhgap5
Rho GTPase activating protein 5.
    
 0.964
arhgef2
Rho guanine nucleotide exchange factor (GEF) 1a.
   
 0.963
ENSHCOP00000009513
Uncharacterized protein.
   
 0.963
DIAPH1
Diaphanous related formin 1.
   
 0.960
arhgef12
Rho guanine nucleotide exchange factor (GEF) 12a.
   
 0.958
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.