STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mef2bMADS-box domain-containing protein. (100 aa)    
Predicted Functional Partners:
cabin1
Calcineurin binding protein 1.
    
 
 0.947
nkx2-5
NK2 homeobox 5.
    
 
 0.928
myog
Myogenin.
    
 0.758
LOC109512112
Myocyte enhancer factor 2d.
  
 
0.719
MEF2D
Myocyte enhancer factor 2D.
  
 
0.719
myf6
Myogenic factor 6.
    
 0.705
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 
 0.676
mef2a
Myocyte enhancer factor 2aa.
  
 
0.664
mef2c
Myocyte enhancer factor 2cb.
  
 
0.664
LOC109517785
Mitogen-activated protein kinase.
   
 0.582
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.