STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109527595Syntaxin 11b, tandem duplicate 2. (298 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.947
snap23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.744
VAMP3
Vesicle associated membrane protein 3.
    
 0.741
LOC109525032
Vesicle-associated membrane protein 8 (endobrevin).
    
 0.726
ENSHCOP00000017593
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.721
LOC109508163
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.721
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 0.717
vamp4
Vesicle-associated membrane protein 4.
    
 0.692
vamp2
Vesicle-associated membrane protein 2.
    
 0.686
ENSHCOP00000026568
Zgc:92912.
    
 0.686
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.