Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUL3 | commd1 | ENSHCOP00000011154 | ENSHCOP00000022209 | Cullin 3; Belongs to the cullin family. | Copper metabolism (Murr1) domain containing 1. | 0.617 |
CUL3 | kctd12 | ENSHCOP00000011154 | ENSHCOP00000016617 | Cullin 3; Belongs to the cullin family. | Potassium channel tetramerisation domain containing 12.1. | 0.485 |
LOC109506870 | commd1 | ENSHCOP00000028060 | ENSHCOP00000022209 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Copper metabolism (Murr1) domain containing 1. | 0.617 |
LOC109506870 | kctd12 | ENSHCOP00000028060 | ENSHCOP00000016617 | CULLIN_2 domain-containing protein; Belongs to the cullin family. | Potassium channel tetramerisation domain containing 12.1. | 0.485 |
LOC109521557 | kctd12 | ENSHCOP00000011042 | ENSHCOP00000016617 | Transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma). | Potassium channel tetramerisation domain containing 12.1. | 0.410 |
LOC109521557 | tfap2d | ENSHCOP00000011042 | ENSHCOP00000008090 | Transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma). | Transcription factor AP-2 delta (activating enhancer binding protein 2 delta). | 0.481 |
commd1 | CUL3 | ENSHCOP00000022209 | ENSHCOP00000011154 | Copper metabolism (Murr1) domain containing 1. | Cullin 3; Belongs to the cullin family. | 0.617 |
commd1 | LOC109506870 | ENSHCOP00000022209 | ENSHCOP00000028060 | Copper metabolism (Murr1) domain containing 1. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.617 |
commd1 | kctd12 | ENSHCOP00000022209 | ENSHCOP00000016617 | Copper metabolism (Murr1) domain containing 1. | Potassium channel tetramerisation domain containing 12.1. | 0.424 |
kctd12 | CUL3 | ENSHCOP00000016617 | ENSHCOP00000011154 | Potassium channel tetramerisation domain containing 12.1. | Cullin 3; Belongs to the cullin family. | 0.485 |
kctd12 | LOC109506870 | ENSHCOP00000016617 | ENSHCOP00000028060 | Potassium channel tetramerisation domain containing 12.1. | CULLIN_2 domain-containing protein; Belongs to the cullin family. | 0.485 |
kctd12 | LOC109521557 | ENSHCOP00000016617 | ENSHCOP00000011042 | Potassium channel tetramerisation domain containing 12.1. | Transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma). | 0.410 |
kctd12 | commd1 | ENSHCOP00000016617 | ENSHCOP00000022209 | Potassium channel tetramerisation domain containing 12.1. | Copper metabolism (Murr1) domain containing 1. | 0.424 |
kctd12 | tfap2a | ENSHCOP00000016617 | ENSHCOP00000003946 | Potassium channel tetramerisation domain containing 12.1. | Transcription factor AP-2 alpha. | 0.410 |
kctd12 | tfap2b | ENSHCOP00000016617 | ENSHCOP00000022518 | Potassium channel tetramerisation domain containing 12.1. | Transcription factor AP-2 beta. | 0.410 |
kctd12 | tfap2d | ENSHCOP00000016617 | ENSHCOP00000008090 | Potassium channel tetramerisation domain containing 12.1. | Transcription factor AP-2 delta (activating enhancer binding protein 2 delta). | 0.417 |
kctd12 | tfap2e | ENSHCOP00000016617 | ENSHCOP00000002631 | Potassium channel tetramerisation domain containing 12.1. | Transcription factor AP-2 epsilon. | 0.410 |
tfap2a | kctd12 | ENSHCOP00000003946 | ENSHCOP00000016617 | Transcription factor AP-2 alpha. | Potassium channel tetramerisation domain containing 12.1. | 0.410 |
tfap2a | tfap2d | ENSHCOP00000003946 | ENSHCOP00000008090 | Transcription factor AP-2 alpha. | Transcription factor AP-2 delta (activating enhancer binding protein 2 delta). | 0.482 |
tfap2b | kctd12 | ENSHCOP00000022518 | ENSHCOP00000016617 | Transcription factor AP-2 beta. | Potassium channel tetramerisation domain containing 12.1. | 0.410 |
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