STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ellElongation factor RNA polymerase II. (631 aa)    
Predicted Functional Partners:
eaf1
ELL associated factor 1.
    
 0.921
aff4
AF4/FMR2 family, member 4.
   
 0.887
LOC109519162
ELL associated factor 2.
    
 0.882
ice2
Interactor of little elongator complex ELL subunit 2.
    
 0.837
LOC109525171
Uncharacterized protein.
   
 0.800
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 0.784
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 0.743
mllt1
MLLT1 super elongation complex subunit a.
    
 0.725
mllt3
MLLT3 super elongation complex subunit.
    
 0.725
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.712
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.