STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vegfcVascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (393 aa)    
Predicted Functional Partners:
Vegfd
Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family.
     
0.977
Vegfb
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
     
 0.968
ENSHCOP00000002650
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
     
0.965
ENSHCOP00000012116
Uncharacterized protein.
    
 0.964
pdgfc
Platelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family.
     
 0.955
LOC109516590
Kinase insert domain receptor like; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.938
flt4
Fms-related tyrosine kinase 4; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.938
vegfa
Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family.
     
 0.934
LOC109511462
Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family.
     
 0.924
hgf
Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily.
   
 
 0.919
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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