STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109525712Cytochrome P450, family 2, subfamily R, polypeptide 1; Belongs to the cytochrome P450 family. (514 aa)    
Predicted Functional Partners:
LOC109522134
Cytochrome P450, family 27, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.944
LOC109507475
Cytochrome P450, family 24, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.931
dhcr7
7-dehydrocholesterol reductase.
   
 0.695
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.580
nbn
Nibrin.
    
 0.561
LOC109531265
BRCA1 associated RING domain 1.
    
 0.557
LOC109521146
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
  
  
 0.544
Aasdh
Uncharacterized protein.
  
 0.535
nadsyn1
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
   
  
 0.526
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.496
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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