STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000017901Zgc:56409. (214 aa)    
Predicted Functional Partners:
ints3
Integrator complex subunit 3.
    
 
 0.872
ints5
Integrator complex subunit 5.
    
   0.868
ints1
Integrator complex subunit 1.
    
   0.868
ints7
Integrator complex subunit 7.
    
   0.499
pot1
Protection of telomeres 1 homolog.
    
 0.494
LOC109520749
Uncharacterized protein.
    
 0.458
LOC109519254
Integrator complex subunit 6.
    
 
 0.444
LOC109524350
Integrator complex subunit 6 like.
    
 
 0.444
rad50
RAD50 homolog, double strand break repair protein.
    
 0.406
zdhhc4
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
 
    
 0.403
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.