Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109528272 | bms1 | ENSHCOP00000006267 | ENSHCOP00000026488 | WD repeat domain 46. | BMS1 ribosome biogenesis factor. | 0.999 |
LOC109528272 | dnttip2 | ENSHCOP00000006267 | ENSHCOP00000018128 | WD repeat domain 46. | Fcf2 domain-containing protein. | 0.989 |
LOC109528272 | fcf1 | ENSHCOP00000006267 | ENSHCOP00000012275 | WD repeat domain 46. | FCF1 rRNA-processing protein. | 0.999 |
LOC109528272 | mphosph10 | ENSHCOP00000006267 | ENSHCOP00000021270 | WD repeat domain 46. | U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. | 0.998 |
LOC109528272 | ngdn | ENSHCOP00000006267 | ENSHCOP00000016197 | WD repeat domain 46. | Neuroguidin, EIF4E binding protein. | 0.997 |
LOC109528272 | nop58 | ENSHCOP00000006267 | ENSHCOP00000023957 | WD repeat domain 46. | NOP58 ribonucleoprotein homolog (yeast). | 0.997 |
LOC109528272 | utp11 | ENSHCOP00000006267 | ENSHCOP00000004496 | WD repeat domain 46. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.998 |
LOC109528272 | utp3 | ENSHCOP00000006267 | ENSHCOP00000028131 | WD repeat domain 46. | UTP3 small subunit processome component. | 0.999 |
LOC109528272 | wdr36 | ENSHCOP00000006267 | ENSHCOP00000000717 | WD repeat domain 46. | WD repeat domain 36. | 0.999 |
LOC109528272 | wdr43 | ENSHCOP00000006267 | ENSHCOP00000017399 | WD repeat domain 46. | WD repeat domain 43. | 0.999 |
bms1 | LOC109528272 | ENSHCOP00000026488 | ENSHCOP00000006267 | BMS1 ribosome biogenesis factor. | WD repeat domain 46. | 0.999 |
bms1 | dnttip2 | ENSHCOP00000026488 | ENSHCOP00000018128 | BMS1 ribosome biogenesis factor. | Fcf2 domain-containing protein. | 0.997 |
bms1 | fcf1 | ENSHCOP00000026488 | ENSHCOP00000012275 | BMS1 ribosome biogenesis factor. | FCF1 rRNA-processing protein. | 0.998 |
bms1 | mphosph10 | ENSHCOP00000026488 | ENSHCOP00000021270 | BMS1 ribosome biogenesis factor. | U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. | 0.999 |
bms1 | ngdn | ENSHCOP00000026488 | ENSHCOP00000016197 | BMS1 ribosome biogenesis factor. | Neuroguidin, EIF4E binding protein. | 0.998 |
bms1 | nop58 | ENSHCOP00000026488 | ENSHCOP00000023957 | BMS1 ribosome biogenesis factor. | NOP58 ribonucleoprotein homolog (yeast). | 0.999 |
bms1 | utp11 | ENSHCOP00000026488 | ENSHCOP00000004496 | BMS1 ribosome biogenesis factor. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.998 |
bms1 | utp3 | ENSHCOP00000026488 | ENSHCOP00000028131 | BMS1 ribosome biogenesis factor. | UTP3 small subunit processome component. | 0.999 |
bms1 | wdr36 | ENSHCOP00000026488 | ENSHCOP00000000717 | BMS1 ribosome biogenesis factor. | WD repeat domain 36. | 0.999 |
bms1 | wdr43 | ENSHCOP00000026488 | ENSHCOP00000017399 | BMS1 ribosome biogenesis factor. | WD repeat domain 43. | 0.999 |
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