STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000018551Uncharacterized protein. (269 aa)    
Predicted Functional Partners:
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
   
 0.675
LOC109520909
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.658
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.658
ENSHCOP00000005860
Protein S100; Belongs to the S-100 family.
    
 0.615
ENSHCOP00000013704
Nyctalopin.
    
 0.601
wdr90
WD repeat domain 90.
   
 0.596
ptrh1
Peptidyl-tRNA hydrolase 1 homolog.
      
 0.541
ENSHCOP00000022295
ILEI domain-containing protein.
      
 0.513
LOC109515868
Retinal outer segment membrane protein 1b.
   
  
 0.503
LOC109513660
Doublecortin-like kinase 1b.
   
 0.496
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.