Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bmi1 | LOC109507630 | ENSHCOP00000004179 | ENSHCOP00000000747 | Bmi1 polycomb ring finger oncogene 1a. | Polyhomeotic homolog 2b (Drosophila). | 0.649 |
Bmi1 | NPTXR | ENSHCOP00000004179 | ENSHCOP00000018743 | Bmi1 polycomb ring finger oncogene 1a. | Neuronal pentraxin receptor. | 0.554 |
Bmi1 | PCGF3 | ENSHCOP00000004179 | ENSHCOP00000020628 | Bmi1 polycomb ring finger oncogene 1a. | Polycomb group ring finger 3. | 0.580 |
Bmi1 | eed | ENSHCOP00000004179 | ENSHCOP00000014568 | Bmi1 polycomb ring finger oncogene 1a. | Embryonic ectoderm development. | 0.776 |
Bmi1 | pcgf5 | ENSHCOP00000004179 | ENSHCOP00000015185 | Bmi1 polycomb ring finger oncogene 1a. | Polycomb group ring finger 5a. | 0.588 |
Bmi1 | rnf2 | ENSHCOP00000004179 | ENSHCOP00000013444 | Bmi1 polycomb ring finger oncogene 1a. | Ring finger protein 2. | 0.982 |
LOC109507630 | Bmi1 | ENSHCOP00000000747 | ENSHCOP00000004179 | Polyhomeotic homolog 2b (Drosophila). | Bmi1 polycomb ring finger oncogene 1a. | 0.649 |
LOC109507630 | NPTXR | ENSHCOP00000000747 | ENSHCOP00000018743 | Polyhomeotic homolog 2b (Drosophila). | Neuronal pentraxin receptor. | 0.578 |
LOC109507630 | PCGF3 | ENSHCOP00000000747 | ENSHCOP00000020628 | Polyhomeotic homolog 2b (Drosophila). | Polycomb group ring finger 3. | 0.441 |
LOC109507630 | eed | ENSHCOP00000000747 | ENSHCOP00000014568 | Polyhomeotic homolog 2b (Drosophila). | Embryonic ectoderm development. | 0.560 |
LOC109507630 | pcgf1 | ENSHCOP00000000747 | ENSHCOP00000018923 | Polyhomeotic homolog 2b (Drosophila). | Polycomb group ring finger 1. | 0.537 |
LOC109507630 | pcgf2 | ENSHCOP00000000747 | ENSHCOP00000001452 | Polyhomeotic homolog 2b (Drosophila). | Polycomb group ring finger 2. | 0.649 |
LOC109507630 | pcgf5 | ENSHCOP00000000747 | ENSHCOP00000015185 | Polyhomeotic homolog 2b (Drosophila). | Polycomb group ring finger 5a. | 0.662 |
LOC109507630 | pcgf6 | ENSHCOP00000000747 | ENSHCOP00000005344 | Polyhomeotic homolog 2b (Drosophila). | Polycomb group ring finger 6. | 0.588 |
LOC109507630 | rnf2 | ENSHCOP00000000747 | ENSHCOP00000013444 | Polyhomeotic homolog 2b (Drosophila). | Ring finger protein 2. | 0.746 |
NPTXR | Bmi1 | ENSHCOP00000018743 | ENSHCOP00000004179 | Neuronal pentraxin receptor. | Bmi1 polycomb ring finger oncogene 1a. | 0.554 |
NPTXR | LOC109507630 | ENSHCOP00000018743 | ENSHCOP00000000747 | Neuronal pentraxin receptor. | Polyhomeotic homolog 2b (Drosophila). | 0.578 |
NPTXR | PCGF3 | ENSHCOP00000018743 | ENSHCOP00000020628 | Neuronal pentraxin receptor. | Polycomb group ring finger 3. | 0.487 |
NPTXR | eed | ENSHCOP00000018743 | ENSHCOP00000014568 | Neuronal pentraxin receptor. | Embryonic ectoderm development. | 0.524 |
NPTXR | pcgf1 | ENSHCOP00000018743 | ENSHCOP00000018923 | Neuronal pentraxin receptor. | Polycomb group ring finger 1. | 0.465 |
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