STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109530615Uncharacterized protein. (211 aa)    
Predicted Functional Partners:
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.538
spata5l1
Spermatogenesis associated 5-like 1.
   
 0.521
SPATA5
Spermatogenesis associated 5.
   
 0.521
etfb
Electron transfer flavoprotein subunit beta.
     
 0.515
eef1akmt2
EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
   
  
 0.451
eloc
Elongin C paralog a; Belongs to the SKP1 family.
   
   0.445
grwd1
Glutamate-rich WD repeat containing 1.
   
  
 0.432
LOC109510862
Myeloid ecotropic viral integration site 3.
      
 0.407
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.