STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
npntNephronectin a. (599 aa)    
Predicted Functional Partners:
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
     
 0.936
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.908
ITGB1-2
Integrin beta; Belongs to the integrin beta chain family.
    
 0.908
LOC109517656
Uncharacterized protein.
    
  0.907
Fras1
Uncharacterized protein.
   
 0.841
LOC109530786
FRAS1 related extracellular matrix 2b.
    
  0.817
ENSHCOP00000023336
Uncharacterized protein.
    
  0.817
ENSHCOP00000012679
Uncharacterized protein.
   
 0.514
ENSHCOP00000013401
Uncharacterized protein.
   
 0.514
ENSHCOP00000025945
Uncharacterized protein.
   
 0.514
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.