mest protein (Hippocampus comes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

mest

Mesoderm specific transcript. (326 aa)

Predicted Functional Partners:

palb2

0.587

ndufab1

0.587

ENSHCOP00000003162

0.577

aasdh

0.540

Aasdh

0.540

pex5l

0.510

Cep41

0.471

ENSHCOP00000013007

0.471

copg2

0.471

pex5

0.471

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Aasdh	aasdh	ENSHCOP00000025819	ENSHCOP00000013115	Uncharacterized protein.	Aminoadipate-semialdehyde dehydrogenase.	0.844
Aasdh	mest	ENSHCOP00000025819	ENSHCOP00000019318	Uncharacterized protein.	Mesoderm specific transcript.	0.540
Aasdh	ndufab1	ENSHCOP00000025819	ENSHCOP00000018200	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.971
Aasdh	palb2	ENSHCOP00000025819	ENSHCOP00000009033	Uncharacterized protein.	PALB2_WD40 domain-containing protein.	0.971
Cep41	ENSHCOP00000003162	ENSHCOP00000012996	ENSHCOP00000003162	Uncharacterized protein.	Leucine-rich repeats and guanylate kinase domain containing.	0.454
Cep41	mest	ENSHCOP00000012996	ENSHCOP00000019318	Uncharacterized protein.	Mesoderm specific transcript.	0.471
ENSHCOP00000003162	Cep41	ENSHCOP00000003162	ENSHCOP00000012996	Leucine-rich repeats and guanylate kinase domain containing.	Uncharacterized protein.	0.454
ENSHCOP00000003162	ENSHCOP00000013007	ENSHCOP00000003162	ENSHCOP00000013007	Leucine-rich repeats and guanylate kinase domain containing.	Uncharacterized protein.	0.454
ENSHCOP00000003162	mest	ENSHCOP00000003162	ENSHCOP00000019318	Leucine-rich repeats and guanylate kinase domain containing.	Mesoderm specific transcript.	0.577
ENSHCOP00000013007	ENSHCOP00000003162	ENSHCOP00000013007	ENSHCOP00000003162	Uncharacterized protein.	Leucine-rich repeats and guanylate kinase domain containing.	0.454
ENSHCOP00000013007	mest	ENSHCOP00000013007	ENSHCOP00000019318	Uncharacterized protein.	Mesoderm specific transcript.	0.471
aasdh	Aasdh	ENSHCOP00000013115	ENSHCOP00000025819	Aminoadipate-semialdehyde dehydrogenase.	Uncharacterized protein.	0.844
aasdh	mest	ENSHCOP00000013115	ENSHCOP00000019318	Aminoadipate-semialdehyde dehydrogenase.	Mesoderm specific transcript.	0.540
aasdh	ndufab1	ENSHCOP00000013115	ENSHCOP00000018200	Aminoadipate-semialdehyde dehydrogenase.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.971
aasdh	palb2	ENSHCOP00000013115	ENSHCOP00000009033	Aminoadipate-semialdehyde dehydrogenase.	PALB2_WD40 domain-containing protein.	0.971
copg2	mest	ENSHCOP00000019303	ENSHCOP00000019318	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Mesoderm specific transcript.	0.471
mest	Aasdh	ENSHCOP00000019318	ENSHCOP00000025819	Mesoderm specific transcript.	Uncharacterized protein.	0.540
mest	Cep41	ENSHCOP00000019318	ENSHCOP00000012996	Mesoderm specific transcript.	Uncharacterized protein.	0.471
mest	ENSHCOP00000003162	ENSHCOP00000019318	ENSHCOP00000003162	Mesoderm specific transcript.	Leucine-rich repeats and guanylate kinase domain containing.	0.577
mest	ENSHCOP00000013007	ENSHCOP00000019318	ENSHCOP00000013007	Mesoderm specific transcript.	Uncharacterized protein.	0.471